Abhishek Chakraborty, PhD

Kidney cancer is among the ten most common forms of human cancer. While manageable in early stages, advanced kidney cancer remains incurable. Therefore, new drugs to treat this disease are urgently required. 

Kidney cancers emerge when normal kidney cells acquire changes in their genetic program. DNA, ouprimary genetic source-code, is like a thread that is compactly wrapped into a complex spool called “chromatin”. This wrapping protects DNA from environmental adversity and also allows precise control to switch genes on/offwhen desired. Importantly, many of the kidney cancer-causing genetic changes promote improper “chromatin” spooling, which possibly drives cancer growth by switching on the function of key tumor-promoting (onco)genes. Identifying and shutting off these misfiring oncogenes could thus block tumor growth, and be a means of therapy.   

Our laboratory has begun comprehensively probing this idea. Using cutting-edge technology, wfirst identified numerous genes that were associated with improper “chromatin” spooling and thus were erroneously switched on in cancerous kidney cellsAmong these genesour follow-up studies shortlisted ten candidate oncogenes that promoted tumor growth in mouse models. Many of these gene products rewire the cancer cell’s metabolismHere, we address which of these metabolic functions are indispensable for kidney cancer and how these changes fuel cancer growth. Cancer cells are perpetually hungry for nutrients to support their uncontrollable growth; therefore, starving kidney cancer cells of essential nutrients can be exploited for therapy. Together, our studies lay the foundations to establish such metabolic genes as clinically useful targets to treat kidney cancer. 

Mariana Byndloss, DVM, PhD

Funded through the Stuart Scott Memorial Cancer Research Fund by John and Michele Truchard in honor of Jo Ann Truchard

Colorectal cancer is the second most common cause of cancer-related death in the United States. New research shows that colorectal cancer cases are increasing in younger age groups. We know that obesity is a major risk factor for colorectal cancer rates among younger adults, but we still don’t understand exactly how it works. Our research goal is to answer this important question. Obesity is mostly caused by unhealthy eating habits, including eating a diet rich in “bad fats”. First, we want to understand how healthy cells are damaged by “bad fats”. This is important because damages cells can produce harmful substances that cause cancer. “Bad fats” may also produce substances that feed harmful bacteria living in our intestines. These bacteria produce toxins that cause cancer. We will try to understand how the bad bacteria use this “food” to grow in the gut of obese individuals. This will help us show that “bad fats” cause cancer both by damaging cells and by feeding cancer-causing bacteria. If successful, our work will show how the dietary habits that lead to obesity can also cause colorectal cancer by damaging cells and feeding the growth of harmful bacteria. These findings will help us find new treatments for patients suffering from cancers caused by obesity.

Aniko Vigh, M.D.

Funded by 2020 Kay Yow Cancer Fund Final Four Research Award

Since the mid-1960s, New Orleans has had a majority African American (AA) population, many of whom are poor and uninsured.  This, along with a lack of communication, misunderstanding of clinical research and limited funding for education and outreach, has led to a lack of access to clinical cancer research trials among this demographic.

The goal of this program is to assist in the enrollment of cancer patients and those at risk for cancer into clinical research trials, with particular emphasis on outreach, recruitment and enrollment of minority patients.

Pivotal to this effort is a patient navigator with extensive training in cultural competence who will be assigned specifically to clinical research.  In addition to assisting enrollment in trials at our clinical sites, the Navigator will also use Tulane’s established relationships with community organizations, community leadersarea physicians and affiliate sites to help educate minorities about clinical research.

The Navigator will identify and approach prospective study patients; build a relationship with themtheir caregivers and family members; and guide them through the enrollment process while serving as an essential link between the patient and the study team.  

Edward Prochownik, M.D., Ph.D.

Funded in partnership with WWE in honor of Connor’s Cure

Hepatoblastoma (HB) is the most common cancer of the liver in children. Although usually very curable, some HBs have less than 20% survival. About 80% of these have changes in a protein known as b-catenin. Many also show abnormal regulation of another protein called YAP. Together, these are the most common changes in HB. Mice develop HB if a mutant form of b-catenin, termed D(90) and a mutant form of YAP known as YAPS127Aare expressed together in the liver although neither one alone causes tumors. 5-10% of HBs also contain mutations in a third protein, NFE2L2, that normally prevents certain types of DNA damage. In initial studies, NFE2L2 mutants sped up tumor growth in response toD(90)+YAPS127A. Unexpectedly, NFE2L2 mutants caused tumors when present in livers with eitherD(90) or YAPS127A. Thus, any two combinations of these mutations cause cancer. This research will ask exactly how each pair of mutant proteins alters tumor growth. It will also identify the small number of common changes that underlie these tumors. This has previously been impossible because the differences between normal livers and tumors is so large.  Identifying the genes shared by different mutant combinations should make this easier. Our proposal is innovative because it will find the most important changes that cause HB. It is translationally important because knowing these changed genes may uncover new ways to treat HB and other pediatric and adult cancers. 

Lluis Morey, Ph.D.

Funded in partnership with Miami Dolphins Foundation

It is estimated that 1 in 8 women will be diagnosed with breast cancer in the US. During the last decades, breast cancer survival rates have greatly improvedmainly due to factors such as earlier detection and a better understanding of the disease. There are at least five different type of breast cancer. In this proposal, we will investigate one of the breast cancer subtypes, called estrogen receptor positive (ER+) breast cancer. ER+ breast cancer needs the estrogen to grow. Estrogen is a hormone that is important for sexual and reproductive development, mainly in women. ER+ breast cancer accounts for 70% of breast cancers and is typically treated with drugs designed to slow or stop the growth of cancer that uses estrogen to develop. Although this type of therapy has been shown to reduce the risk of relapse and death from breast cancer, one third of patients develop resistance. This results in the spreading of cancer cells to other organsknown as metastasis. Thus, there is a critical need for identifying new treatments for patients who develop resistance to current therapies. The focus of this proposal is to understand the mechanisms of resistance to therapy and to overcome resistance by using a novel  therapeutic approach. This is the next step towards our overarching goal, which is the identification of new therapeutic opportunities for the treatment of patients with aggressive breast cancer. 

Mary Markiewicz, Ph.D.

Funded in partnership with the Kansas City Chiefs Football Club

The immune system can destroy cancer cells. This is being taken advantage of in cancer therapy, with scientists trying to find ways to activate the immune system to better kill cancer cells. One therapy involves the infusion of immune cells named natural killer (NK) cells. This therapy works well for some types of cancers. However, there has been limited success with this therapy against most tumors. The ultimate goal of our research is to increase the ability of this therapy to work against more cancers. One method proposed for making NK cells better at killing cancer cells is treating the cells with activating signals that are termed IL-12, IL-15, and IL-18. We show that this makes the NK cells express proteins that affects the ability of the cells to kill cancer cells. This leads us to think that IL-12,15, and18 treatment alters NK cells in a way that can be good for the treatment of some, but bad for other, types of cancer. This is of high concern because IL-12,15,18 treatment is proposed as a way to enhance NK cell treatment of cancers and is being tested in patients. Therefore, it is critical we determine how IL-12,15,18-treated NK cells affect the growth of different types of cancer. Here we propose to determine how IL-12,15,18-treatment, and the proteins this treatment induces on NK cells, alters the ability of NK cells to kill cancer in mouse models. 

Hanlee Ji, M.D.

Funded by Gastric Cancer Foundation

My research interest is cancer genetics with an emphasis on clinically relevant questions that will improve our understanding of the cancer genetics of clinical phenotype and simultaneously improve patient care in oncology.  I have extensive bench research experience in the fields of genome sequencing technology development, human genetic analysis through human genome sequencing and molecular assay development.  My research benefits from the various innovations in genomic and genetic technologies that my group has developed. 

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